BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019G08SP1|AL427528
(806 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1586 690 0.0
>3x_Contig1586
Length = 12315
Score = 690 bits (345), Expect = 0.0
Identities = 435/471 (92%)
Strand = Plus / Minus
Query: 336 taccgtagattcgcctttccgaaagtacgagctttggatcaacaatttatagagttgtac 395
||||||||||||||| ||||||||||||| ||||||| ||| | |||||||||| || |
Sbjct: 12253 taccgtagattcgccattccgaaagtacgcgctttggcacaaaactttatagagtagtcc 12194
Query: 396 gatgatactgggatcataaagctggccacggaaaacaactggctatctgttgaatggtga 455
||||| | | | || ||| ||| || | ||||| ||||| | ||||||| ||||||||
Sbjct: 12193 gatgaaaatagaatattaatgctagcaaaagaaaaaaactgacaatctgttaaatggtga 12134
Query: 456 attgaatctcctcattgctggacctttttttttttttttttgaacagtgggtgaatcaat 515
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 12133 attgaatctcctcattgaatggcctttttttttttttttttgaacagtgggtgaatcaat 12074
Query: 516 tgagtcttcatatctaamagaccaaaattccttattaacaactagaattgatgtcaacat 575
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12073 tgagtcttcatatctaaaagaccaaaattccttattaacaactagaattgatgtcaacat 12014
Query: 576 tctagtgtgtgaatattatgttccgagtttactatgtagtatcatataactmamammtcc 635
||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||
Sbjct: 12013 tctagtgtgtgaatattatgttccgagtttactatgtagtatcatataactaaaaaatcc 11954
Query: 636 tcattcttaaaavaaaaagcgtcatggtgcgctttttgatatgtctgattccgtctattg 695
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11953 tcattcttaaaaaaaaaagcgtcatggtgcgctttttgatatgtctgattccgtctattg 11894
Query: 696 gwatcccgatgcaacawaccttctaccatacaatgcagcgctactggcagaaacggtcgt 755
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11893 gaatcccgatgcaacaaaccttctaccatacaatgcagcgctactggcagaaacggtcgt 11834
Query: 756 caacagcaaaggccaaaccttaccataacgcaatgccttaacakatccacg 806
||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 11833 caacagcaaaggccaaaccttaccataacgcaatgccttaacagatccacg 11783
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,264
Number of Sequences: 1807
Number of extensions: 16264
Number of successful extensions: 3944
Number of sequences better than 1.0e-20: 1
length of query: 806
length of database: 10,358,551
effective HSP length: 16
effective length of query: 790
effective length of database: 10,329,639
effective search space: 8160414810
effective search space used: 8160414810
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)